miRBase Version 15.0 is Released

by Chris on April 26, 2010

in miRBase

UPDATE: miRBase version 19 is the current version
********

April 26th, 2010 – miRBase microRNA Sequence Database Updated to Release 15.0

The latest version (15.0) of the miRBase sequence database for known miRNAs was released today.

miRBase 15 is freely available at http://www.mirbase.org/. You can find a quick summary for the new release at ftp://mirbase.org/pub/mirbase/CURRENT/README.

Highlights of the new release:

  • Release 15 represents a major update to the database increasing the number of mature miRNA sequences by a full 48% over release 14.0.
  • This latest release features a total of 15,632 mature miRNA sequences.
  • The number of verified microRNAs has increased from 10,883 to 14,197 hairpin precursor miRNAs.
  • 18 new species have been added bringing the total to 133 species.
  • Many sequences have been updated or revised.
  • New sequences have been added to important model species – Human (219), Mouse (11), Rat (1), Drosophila (218), Nematode sp. (311), Arabidopsis (9).
  • New sequences have been added to important agricultural species – Cow (50), Pig (98), Silkworm (396), Peanut (23), Cotton sp.(24), Orange sp.(25), Rice (33), Sorghum (8), Corn (61).
  • A total of 526 new plant sequences and 53 new virus sequences
  • Other important new species include – Zebra Finch, Japanese Killifish, Yellow Fever & West Nile Mosquitos, Castor Oil Plant

mirbase_15_large

Incoming search terms for this article:

{ 3 comments… read them below or add one }

Stephanie May 3, 2010 at 9:53 am

Not that it matters in terms of miRNA function, but I think it would be nice if the mirtrons were distinguished from the traditional miRNAs in some way. It might help when looking at Dicer knockouts to figure out what miRNAs may still be around.

Nico May 10, 2010 at 2:31 pm

I totally agree with that, and would love miRBase to read these comments and do something about it….

Rex May 14, 2010 at 7:21 am

Very good job!
Give me great help.

Leave a Comment

Previous post:

Next post: