The UEA small RNA Workbench Version 4.4

A suite of tools for analyzing micro RNA and other small RNA data from High-Throughput Sequencing devices

UEA sRNA workbenchThis release is the next Alpha test for the latest version of the UEA small RNA workbench, Version 4.0 (check the frequently encountered problems for a list of known issues).

This version is released as java binaries only to streamline the release process until the software moves into the stable release stage of its lifecycle.

The authors highly recommend using the latest version of Java to run this build. Anything past update release 111 of the JDK/JRE is well advised due to fixes made to the javascript portion of JavaFX.

This release is only available as an ON DISK mode build.

NEW: Filter 2

A new version of the filter tool is now available as part of a pre-configured workflow (currently the workflow is on its own, new workflows will be available soon with the filter tool included).

The Filter 2 program retains all of the functionality of the original tool with the added ability to update the RFAM database files. The original Filter program used an old version of the t/rRNA database taken from the original srna tools programs. The updated database is likely to be much larger and therefore will add to the processing time.

Download

small RNA workbench website

 

Subscribe to the miRNA blog

Thank you for subscribing.

Something went wrong.

Related Posts

Add Comment